Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AL137013.1-201ENST00000432946 1228 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AL359075.1-203ENST00000462729 1002 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC005332.3-201ENST00000589904 676 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AL390719.2-201ENST00000606993 987 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC005363.2-201ENST00000618631 242 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC010460.3-201ENST00000511359 1579 ntBASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-7A0A0A0MS04 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC046185.3-201ENST00000623228 1824 ntBASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 TERF1P1-201ENST00000311003 1181 ntBASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 MYCLP1-201ENST00000372451 1075 ntBASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC117947.1-201ENST00000427448 529 ntBASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 HOMER2P1-201ENST00000455653 964 ntBASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC012306.2-201ENST00000609350 630 ntBASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms