Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.77■□□□□ 0.75
CLIC4Q9Y696 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLIC4Q9Y696 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLIC4Q9Y696 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLIC4Q9Y696 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CLIC4Q9Y696 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLIC4Q9Y696 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AC148477.5-201ENST00000625164 1645 ntBASIC19.76■□□□□ 0.75
CLIC4Q9Y696 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AL118508.1-201ENST00000613502 2345 ntBASIC19.76■□□□□ 0.75
CLIC4Q9Y696 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 PMPCAP1-201ENST00000508114 1576 ntBASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AC003669.1-201ENST00000334569 611 ntBASIC19.76■□□□□ 0.75
CLIC4Q9Y696 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AP000867.3-201ENST00000524675 377 ntBASIC19.76■□□□□ 0.75
CLIC4Q9Y696 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIC4Q9Y696 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 AC092119.3-201ENST00000612618 583 ntBASIC19.75■□□□□ 0.75
CLIC4Q9Y696 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 AC078925.2-201ENST00000624013 1973 ntBASIC19.75■□□□□ 0.75
CLIC4Q9Y696 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIC4Q9Y696 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.74■□□□□ 0.75
CLIC4Q9Y696 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms