Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB13Q9Y5F0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 AL691447.1-201ENST00000419456 387 ntBASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 MTDHP3-201ENST00000594186 672 ntBASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 AL355877.3-201ENST00000622820 899 ntBASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB13Q9Y5F0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 SAPCD2P3-201ENST00000455031 850 ntBASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 IFNL4P1-201ENST00000607083 540 ntBASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB13Q9Y5F0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 AL135999.2-201ENST00000622438 1686 ntBASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 PRYP5-201ENST00000451909 266 ntBASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHB13Q9Y5F0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB13Q9Y5F0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PCDHB13Q9Y5F0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms