Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.99■□□□□ 0.63
Q9Y3F1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Q9Y3F1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Q9Y3F1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.99■□□□□ 0.63
Q9Y3F1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.99■□□□□ 0.63
Q9Y3F1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.99■□□□□ 0.63
Q9Y3F1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9Y3F1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Q9Y3F1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.98■□□□□ 0.63
Q9Y3F1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.98■□□□□ 0.63
Q9Y3F1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 BASP1P1-201ENST00000430708 665 ntBASIC18.98■□□□□ 0.63
Q9Y3F1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Q9Y3F1 KLF2P3-201ENST00000451977 1087 ntBASIC18.98■□□□□ 0.63
Q9Y3F1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Q9Y3F1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.98■□□□□ 0.63
Q9Y3F1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.98■□□□□ 0.63
Q9Y3F1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9Y3F1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.98■□□□□ 0.63
Q9Y3F1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Q9Y3F1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.97■□□□□ 0.63
Q9Y3F1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Q9Y3F1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 SPDYE7P-202ENST00000420373 878 ntBASIC18.97■□□□□ 0.63
Q9Y3F1 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.97■□□□□ 0.63
Q9Y3F1 AC093214.1-201ENST00000511688 1107 ntBASIC18.97■□□□□ 0.63
Q9Y3F1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.97■□□□□ 0.63
Q9Y3F1 AC091167.2-201ENST00000579581 588 ntBASIC18.97■□□□□ 0.63
Q9Y3F1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.97■□□□□ 0.63
Q9Y3F1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 WASH6P-202ENST00000359512 1437 ntBASIC18.97■□□□□ 0.63
Q9Y3F1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9Y3F1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.97■□□□□ 0.63
Q9Y3F1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9Y3F1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
Q9Y3F1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.96■□□□□ 0.63
Q9Y3F1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 TOP3BP1-201ENST00000420768 1380 ntBASIC18.96■□□□□ 0.63
Q9Y3F1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Q9Y3F1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.96■□□□□ 0.63
Q9Y3F1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.96■□□□□ 0.63
Q9Y3F1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
Q9Y3F1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Q9Y3F1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.96■□□□□ 0.63
Q9Y3F1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Q9Y3F1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 INGX-202ENST00000489074 768 ntBASIC18.96■□□□□ 0.63
Q9Y3F1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.96■□□□□ 0.63
Q9Y3F1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.96■□□□□ 0.63
Q9Y3F1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9Y3F1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.96■□□□□ 0.63
Q9Y3F1 AC026150.2-201ENST00000564693 1156 ntBASIC18.96■□□□□ 0.63
Q9Y3F1 AC140878.1-201ENST00000565277 250 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms