Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 MRPL3P1-201ENST00000400109 1033 ntBASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHA4Q9UN74 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 KRT18P27-201ENST00000427733 1299 ntBASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AC009078.2-202ENST00000463353 338 ntBASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 SLC25A6P4-201ENST00000586535 553 ntBASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AC006557.2-201ENST00000592985 1240 ntBASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 AL773604.1-201ENST00000617417 272 ntBASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 FAM215A-202ENST00000632077 792 ntBASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHA4Q9UN74 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 GPR89P-201ENST00000407924 1495 ntBASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHA4Q9UN74 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms