Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 EMBP1-201ENST00000458200 901 ntBASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 AL139424.1-201ENST00000607572 797 ntBASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 PRORSD1P-202ENST00000563365 2154 ntBASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGC3Q9UN70 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 AC022211.2-201ENST00000585075 2527 ntBASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 AC139887.3-201ENST00000568585 713 ntBASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGC3Q9UN70 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AL450487.1-201ENST00000426799 995 ntBASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AL121912.1-201ENST00000603683 238 ntBASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AC004706.3-202ENST00000621574 984 ntBASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 HCG11-201ENST00000411553 5696 ntBASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGC3Q9UN70 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 HTR7P1-202ENST00000624664 4411 ntBASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGC3Q9UN70 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms