Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.79■□□□□ 0.76
SYNPO2Q9UMS6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 AC109635.5-201ENST00000533593 962 ntBASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 AC124947.2-201ENST00000547118 1133 ntBASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 SNHG9-202ENST00000564014 471 ntBASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 MIR3909-201ENST00000579518 119 ntBASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPO2Q9UMS6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 RPS8P6-201ENST00000426177 609 ntBASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 CNN2P11-201ENST00000429351 262 ntBASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 FAM86C2P-203ENST00000528684 1004 ntBASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
SYNPO2Q9UMS6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SYNPO2Q9UMS6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.77■□□□□ 0.75
SYNPO2Q9UMS6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SYNPO2Q9UMS6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 FRMD8P1-201ENST00000440433 1524 ntBASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 AC092919.2-201ENST00000623631 1645 ntBASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPO2Q9UMS6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms