Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP25Q9UHP3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
USP25Q9UHP3 CROCCP1-201ENST00000426910 5675 ntBASIC19.89■□□□□ 0.77
USP25Q9UHP3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 AC063952.2-201ENST00000498792 1227 ntBASIC19.89■□□□□ 0.77
USP25Q9UHP3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 VENTXP5-201ENST00000523979 775 ntBASIC19.89■□□□□ 0.77
USP25Q9UHP3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP25Q9UHP3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 AL596257.1-201ENST00000641463 2694 ntBASIC19.89■□□□□ 0.77
USP25Q9UHP3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP25Q9UHP3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.88■□□□□ 0.77
USP25Q9UHP3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP25Q9UHP3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 RNF126P1-202ENST00000569893 925 ntBASIC19.87■□□□□ 0.77
USP25Q9UHP3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.87■□□□□ 0.77
USP25Q9UHP3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP25Q9UHP3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms