Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 AC004835.2-201ENST00000603762 682 ntBASIC18■□□□□ 0.47
DNMT3BQ9UBC3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 AL139327.4-201ENST00000612362 153 ntBASIC18■□□□□ 0.47
DNMT3BQ9UBC3 REXO1L3P-201ENST00000622202 1288 ntBASIC18■□□□□ 0.47
DNMT3BQ9UBC3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 AC087163.2-201ENST00000457299 853 ntBASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.99■□□□□ 0.47
DNMT3BQ9UBC3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 AL121761.2-201ENST00000598007 1648 ntBASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 MIR3197-201ENST00000582241 73 ntBASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
DNMT3BQ9UBC3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 MIR770-201ENST00000390219 98 ntBASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 AC022145.2-201ENST00000598203 171 ntBASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.97■□□□□ 0.47
DNMT3BQ9UBC3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms