Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 ABCD1P5-201ENST00000445663 754 ntBASIC16.24■□□□□ 0.19
CNIH4Q9P003 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 AL121912.1-201ENST00000603683 238 ntBASIC16.24■□□□□ 0.19
CNIH4Q9P003 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 AC010460.3-201ENST00000511359 1579 ntBASIC16.24■□□□□ 0.19
CNIH4Q9P003 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CNIH4Q9P003 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CNIH4Q9P003 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNIH4Q9P003 BX276092.7-203ENST00000637198 1536 ntBASIC16.23■□□□□ 0.19
CNIH4Q9P003 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNIH4Q9P003 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 AKR1C7P-201ENST00000305623 895 ntBASIC16.22■□□□□ 0.19
CNIH4Q9P003 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNIH4Q9P003 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 AC026396.1-201ENST00000419388 421 ntBASIC16.22■□□□□ 0.19
CNIH4Q9P003 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.22■□□□□ 0.19
CNIH4Q9P003 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms