Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 FAM210CP-201ENST00000445714 574 ntBASIC16.16■□□□□ 0.18
RLIMQ9NVW2 AC091607.1-201ENST00000490318 1060 ntBASIC16.16■□□□□ 0.18
RLIMQ9NVW2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 AL139327.4-201ENST00000612362 153 ntBASIC16.16■□□□□ 0.18
RLIMQ9NVW2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RLIMQ9NVW2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 AL138831.2-201ENST00000606564 490 ntBASIC16.15■□□□□ 0.18
RLIMQ9NVW2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.15■□□□□ 0.18
RLIMQ9NVW2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RLIMQ9NVW2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RLIMQ9NVW2 AC016734.2-201ENST00000624325 1377 ntBASIC16.14■□□□□ 0.17
RLIMQ9NVW2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.14■□□□□ 0.17
RLIMQ9NVW2 BX276092.5-203ENST00000456199 560 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms