Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.96□□□□□ -0.49
CDC42SE2Q9NRR3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CDC42SE2Q9NRR3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AC109462.3-201ENST00000573934 613 ntBASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AC005332.3-201ENST00000589904 676 ntBASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE2Q9NRR3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 BX664615.1-201ENST00000443558 458 ntBASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 AL359075.1-203ENST00000462729 1002 ntBASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 AC010203.1-204ENST00000548782 407 ntBASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 AC019129.2-201ENST00000609837 1235 ntBASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE2Q9NRR3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms