Protein–RNA interactions for Protein: Q9NP64

ZCCHC17, Nucleolar protein of 40 kDa, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17Q9NP64 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 AC022145.2-201ENST00000598203 171 ntBASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 ANO7L1-203ENST00000602586 1720 ntBASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC17Q9NP64 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ZCCHC17Q9NP64 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 TNRC18P3-201ENST00000441896 2691 ntBASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 CXCL1P1-201ENST00000502804 216 ntBASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 STK19B-204ENST00000512515 211 ntBASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC17Q9NP64 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 AC138761.1-201ENST00000584393 385 ntBASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 AC005498.2-205ENST00000593218 784 ntBASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.2■□□□□ 0.82
ZCCHC17Q9NP64 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms