Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-1Q9BYQ7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-1Q9BYQ7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC8.89□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC090164.3-201ENST00000610780 2143 ntBASIC8.89□□□□□ -0.99
KRTAP4-1Q9BYQ7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
KRTAP4-1Q9BYQ7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-1Q9BYQ7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC087289.5-201ENST00000586076 3175 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 TMPRSS11CP-201ENST00000453277 683 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC004890.2-204ENST00000481968 304 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ALG1L8P-201ENST00000533887 760 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AP000842.3-202ENST00000569238 1080 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 MIR4453-201ENST00000584019 89 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 MIR6080-201ENST00000617359 66 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC012317.2-201ENST00000623305 2251 ntBASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-1Q9BYQ7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC012569.1-201ENST00000591191 1524 ntBASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-1Q9BYQ7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms