Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFAF3Q9BU61 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 AL513523.2-202ENST00000427283 2040 ntBASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 MTMR9LP-203ENST00000426597 1545 ntBASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 AP000593.1-201ENST00000393668 712 ntBASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 LINC01238-205ENST00000567549 1107 ntBASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFAF3Q9BU61 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.46□□□□□ -0.26
NDUFAF3Q9BU61 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 TSPY17P-201ENST00000450329 467 ntBASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 AL445228.2-201ENST00000605589 952 ntBASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NDUFAF3Q9BU61 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NDUFAF3Q9BU61 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms