Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 AC124947.2-201ENST00000547118 1133 ntBASIC16.91■□□□□ 0.3
EBF4Q9BQW3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 AL512604.3-201ENST00000569583 964 ntBASIC16.91■□□□□ 0.3
EBF4Q9BQW3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF4Q9BQW3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 HMGA1P5-201ENST00000412453 271 ntBASIC16.9■□□□□ 0.3
EBF4Q9BQW3 AC096633.1-201ENST00000422446 749 ntBASIC16.9■□□□□ 0.3
EBF4Q9BQW3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.9■□□□□ 0.3
EBF4Q9BQW3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 CROCCP1-201ENST00000426910 5675 ntBASIC16.9■□□□□ 0.3
EBF4Q9BQW3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 AL513523.2-202ENST00000427283 2040 ntBASIC16.9■□□□□ 0.3
EBF4Q9BQW3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF4Q9BQW3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
EBF4Q9BQW3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
EBF4Q9BQW3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 ECEL1P3-201ENST00000427961 737 ntBASIC16.89■□□□□ 0.29
EBF4Q9BQW3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 MTCL1P1-201ENST00000446207 792 ntBASIC16.89■□□□□ 0.29
EBF4Q9BQW3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 AL136038.4-201ENST00000603606 1261 ntBASIC16.89■□□□□ 0.29
EBF4Q9BQW3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EBF4Q9BQW3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EBF4Q9BQW3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms