Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 AC005498.2-205ENST00000593218 784 ntBASIC18.34■□□□□ 0.53
CASD1Q96PB1 AL096865.1-201ENST00000606796 927 ntBASIC18.34■□□□□ 0.53
CASD1Q96PB1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CASD1Q96PB1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CASD1Q96PB1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CASD1Q96PB1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.33■□□□□ 0.53
CASD1Q96PB1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CASD1Q96PB1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CASD1Q96PB1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASD1Q96PB1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 AL135744.1-201ENST00000565098 629 ntBASIC18.33■□□□□ 0.52
CASD1Q96PB1 AC005412.3-201ENST00000580309 715 ntBASIC18.33■□□□□ 0.52
CASD1Q96PB1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 AC133963.1-201ENST00000504166 1679 ntBASIC18.33■□□□□ 0.52
CASD1Q96PB1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CASD1Q96PB1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASD1Q96PB1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.32■□□□□ 0.52
CASD1Q96PB1 FAM58DP-201ENST00000428076 619 ntBASIC18.32■□□□□ 0.52
CASD1Q96PB1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 RN7SL589P-201ENST00000481268 310 ntBASIC18.32■□□□□ 0.52
CASD1Q96PB1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 DUX4L17-201ENST00000557360 1267 ntBASIC18.32■□□□□ 0.52
CASD1Q96PB1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 RARRES2P8-201ENST00000566335 367 ntBASIC18.32■□□□□ 0.52
CASD1Q96PB1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 AC015911.4-201ENST00000588022 1070 ntBASIC18.32■□□□□ 0.52
CASD1Q96PB1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASD1Q96PB1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.32■□□□□ 0.52
CASD1Q96PB1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CASD1Q96PB1 AKAP8P1-201ENST00000434743 1349 ntBASIC18.31■□□□□ 0.52
CASD1Q96PB1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASD1Q96PB1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms