Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 FLJ16779-201ENST00000612722 7638 ntBASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP6Q96FZ7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 KRT8P9-201ENST00000558927 1449 ntBASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 DGCR10-201ENST00000609839 495 ntBASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 REXO1L10P-201ENST00000615707 1290 ntBASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 REXO1L12P-201ENST00000622156 912 ntBASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP6Q96FZ7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 TSPY7P-201ENST00000431358 1114 ntBASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 AC116562.2-201ENST00000507042 360 ntBASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 AP003071.4-201ENST00000562276 1284 ntBASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 MIR4674-201ENST00000582457 87 ntBASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP6Q96FZ7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms