Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 POM121L3P-201ENST00000419331 1163 ntBASIC18.33■□□□□ 0.52
TRIM11Q96F44 IGHV3-47-201ENST00000425060 335 ntBASIC18.33■□□□□ 0.52
TRIM11Q96F44 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 AC069148.1-201ENST00000608741 768 ntBASIC18.33■□□□□ 0.52
TRIM11Q96F44 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 NKILA-202ENST00000614771 2598 ntBASIC18.33■□□□□ 0.52
TRIM11Q96F44 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM11Q96F44 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 AC104819.1-201ENST00000504587 486 ntBASIC18.32■□□□□ 0.52
TRIM11Q96F44 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 AC092329.2-201ENST00000598402 547 ntBASIC18.32■□□□□ 0.52
TRIM11Q96F44 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM11Q96F44 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM11Q96F44 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 AC074051.2-201ENST00000565115 352 ntBASIC18.31■□□□□ 0.52
TRIM11Q96F44 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM11Q96F44 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM11Q96F44 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms