Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.46■□□□□ 0.55
SHC3Q92529 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
SHC3Q92529 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SHC3Q92529 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.45■□□□□ 0.54
SHC3Q92529 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC3Q92529 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.45■□□□□ 0.54
SHC3Q92529 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 AC105020.1-201ENST00000435356 2205 ntBASIC18.45■□□□□ 0.54
SHC3Q92529 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SHC3Q92529 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SHC3Q92529 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC3Q92529 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.45■□□□□ 0.54
SHC3Q92529 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SHC3Q92529 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.45■□□□□ 0.54
SHC3Q92529 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC3Q92529 AL139288.1-201ENST00000623748 933 ntBASIC18.45■□□□□ 0.54
SHC3Q92529 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.45■□□□□ 0.54
SHC3Q92529 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 AC092068.3-201ENST00000587894 2016 ntBASIC18.45■□□□□ 0.54
SHC3Q92529 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SHC3Q92529 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
SHC3Q92529 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHC3Q92529 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SHC3Q92529 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SHC3Q92529 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 AC106886.4-201ENST00000623557 2502 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
SHC3Q92529 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.44■□□□□ 0.54
SHC3Q92529 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SHC3Q92529 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SHC3Q92529 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 LINC00982-205ENST00000420957 435 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 BX005266.1-201ENST00000473402 457 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.44■□□□□ 0.54
SHC3Q92529 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.44■□□□□ 0.54
SHC3Q92529 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.44■□□□□ 0.54
SHC3Q92529 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.44■□□□□ 0.54
SHC3Q92529 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 PRELID1P1-202ENST00000567272 903 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 NKAPP1-205ENST00000585790 367 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 AL355877.3-201ENST00000622820 899 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHC3Q92529 HCG11-201ENST00000411553 5696 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC3Q92529 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 AC011676.5-201ENST00000624864 2660 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SHC3Q92529 AC005915.1-201ENST00000624912 2018 ntBASIC18.44■□□□□ 0.54
SHC3Q92529 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC3Q92529 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.43■□□□□ 0.54
SHC3Q92529 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
SHC3Q92529 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC3Q92529 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.43■□□□□ 0.54
SHC3Q92529 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC3Q92529 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC3Q92529 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.43■□□□□ 0.54
SHC3Q92529 AC091304.2-201ENST00000564639 760 ntBASIC18.43■□□□□ 0.54
SHC3Q92529 MTDHP3-201ENST00000594186 672 ntBASIC18.43■□□□□ 0.54
SHC3Q92529 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.43■□□□□ 0.54
SHC3Q92529 REXO1L6P-202ENST00000619970 1078 ntBASIC18.43■□□□□ 0.54
SHC3Q92529 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.43■□□□□ 0.54
SHC3Q92529 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SHC3Q92529 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC3Q92529 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms