Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 HLA-A-202ENST00000376806 1854 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 KRT18P65-201ENST00000439811 1286 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 MFAP1P1-201ENST00000442257 1255 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AC006970.2-201ENST00000450065 779 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AC098934.4-201ENST00000564127 592 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AC124016.1-201ENST00000609552 612 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 CR769767.2-201ENST00000622735 460 ntBASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 AC006538.1-201ENST00000567905 1585 ntBASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L1Q8WWY6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L1Q8WWY6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms