Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.03■□□□□ 0.48
LEMD2Q8NC56 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 FAM58CP-201ENST00000435741 640 ntBASIC18.02■□□□□ 0.48
LEMD2Q8NC56 HMGN1P19-201ENST00000436976 333 ntBASIC18.02■□□□□ 0.48
LEMD2Q8NC56 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 PAWRP1-201ENST00000451083 565 ntBASIC18.02■□□□□ 0.48
LEMD2Q8NC56 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 AP000344.2-201ENST00000512987 629 ntBASIC18.02■□□□□ 0.48
LEMD2Q8NC56 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LEMD2Q8NC56 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
LEMD2Q8NC56 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AC129492.6-201ENST00000611383 1305 ntBASIC18.01■□□□□ 0.47
LEMD2Q8NC56 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AC068137.2-201ENST00000605408 478 ntBASIC18.01■□□□□ 0.47
LEMD2Q8NC56 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 AC068880.1-201ENST00000507289 2297 ntBASIC18.01■□□□□ 0.47
LEMD2Q8NC56 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LEMD2Q8NC56 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
LEMD2Q8NC56 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18■□□□□ 0.47
LEMD2Q8NC56 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18■□□□□ 0.47
LEMD2Q8NC56 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18■□□□□ 0.47
LEMD2Q8NC56 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LEMD2Q8NC56 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms