Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 AC141586.5-201ENST00000624546 2050 ntBASIC16.3■□□□□ 0.2
ARHGEF39Q8N4T4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 PRSS29P-201ENST00000440800 595 ntBASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ARHGEF39Q8N4T4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms