Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHPFQ8IZ52 LTB4R2-202ENST00000528054 3092 ntBASIC17.65■□□□□ 0.42
CHPFQ8IZ52 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHPFQ8IZ52 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.65■□□□□ 0.42
CHPFQ8IZ52 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.65■□□□□ 0.42
CHPFQ8IZ52 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHPFQ8IZ52 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.64■□□□□ 0.42
CHPFQ8IZ52 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CHPFQ8IZ52 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.64■□□□□ 0.41
CHPFQ8IZ52 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 AC005829.1-201ENST00000570002 483 ntBASIC17.64■□□□□ 0.41
CHPFQ8IZ52 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 AC010654.1-201ENST00000615722 808 ntBASIC17.64■□□□□ 0.41
CHPFQ8IZ52 AC092865.6-201ENST00000642101 219 ntBASIC17.64■□□□□ 0.41
CHPFQ8IZ52 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHPFQ8IZ52 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 DNAJB3-202ENST00000449667 1266 ntBASIC17.63■□□□□ 0.41
CHPFQ8IZ52 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 AL353135.1-201ENST00000606729 504 ntBASIC17.63■□□□□ 0.41
CHPFQ8IZ52 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 AC020916.1-201ENST00000587762 1774 ntBASIC17.63■□□□□ 0.41
CHPFQ8IZ52 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.63■□□□□ 0.41
CHPFQ8IZ52 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 AP002414.1-201ENST00000391405 1147 ntBASIC17.62■□□□□ 0.41
CHPFQ8IZ52 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 GGTLC5P-201ENST00000617623 998 ntBASIC17.62■□□□□ 0.41
CHPFQ8IZ52 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CHPFQ8IZ52 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms