Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 SEC1P-202ENST00000473944 940 ntBASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 AL358472.4-201ENST00000633140 710 ntBASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 AL603756.1-201ENST00000606511 2163 ntBASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CRLF3Q8IUI8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 KRT8P47-201ENST00000604727 1398 ntBASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
CRLF3Q8IUI8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 AC008894.3-201ENST00000624324 3103 ntBASIC17.33■□□□□ 0.37
CRLF3Q8IUI8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 STARP1-201ENST00000397973 869 ntBASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 SPDYE15P-201ENST00000424157 909 ntBASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.33■□□□□ 0.36
CRLF3Q8IUI8 AC112907.2-201ENST00000448639 330 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms