Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.37■□□□□ 0.53
RNF135Q8IUD6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 GK-202ENST00000378941 458 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 ELK2BP-201ENST00000415014 1224 ntBASIC18.36■□□□□ 0.53
RNF135Q8IUD6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 AC025678.2-201ENST00000562061 970 ntBASIC18.36■□□□□ 0.53
RNF135Q8IUD6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 AC006504.4-201ENST00000592118 1568 ntBASIC18.36■□□□□ 0.53
RNF135Q8IUD6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 SIGLEC16-201ENST00000599858 1437 ntBASIC18.36■□□□□ 0.53
RNF135Q8IUD6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF135Q8IUD6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.35■□□□□ 0.53
RNF135Q8IUD6 FAM58CP-201ENST00000435741 640 ntBASIC18.35■□□□□ 0.53
RNF135Q8IUD6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 AC004790.2-201ENST00000623588 572 ntBASIC18.35■□□□□ 0.53
RNF135Q8IUD6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF135Q8IUD6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF135Q8IUD6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms