Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 AL022326.1-202ENST00000641533 845 ntBASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD3Q7Z3D4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 AC021087.4-201ENST00000563761 564 ntBASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 MTDHP4-201ENST00000600287 670 ntBASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
LYSMD3Q7Z3D4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LYSMD3Q7Z3D4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LYSMD3Q7Z3D4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms