Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 AC005840.4-201ENST00000541242 2494 ntBASIC18.12■□□□□ 0.49
CBX1P83916 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.12■□□□□ 0.49
CBX1P83916 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.12■□□□□ 0.49
CBX1P83916 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.12■□□□□ 0.49
CBX1P83916 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 MYCNOS-205ENST00000641950 531 ntBASIC18.12■□□□□ 0.49
CBX1P83916 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.12■□□□□ 0.49
CBX1P83916 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CBX1P83916 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.12■□□□□ 0.49
CBX1P83916 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 AC005089.1-201ENST00000619486 2241 ntBASIC18.11■□□□□ 0.49
CBX1P83916 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.11■□□□□ 0.49
CBX1P83916 PPT1-215ENST00000641471 2368 ntBASIC18.11■□□□□ 0.49
CBX1P83916 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.11■□□□□ 0.49
CBX1P83916 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 TERF1P5-201ENST00000477545 1207 ntBASIC18.11■□□□□ 0.49
CBX1P83916 AL162412.1-201ENST00000567129 965 ntBASIC18.11■□□□□ 0.49
CBX1P83916 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.11■□□□□ 0.49
CBX1P83916 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.11■□□□□ 0.49
CBX1P83916 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CBX1P83916 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CBX1P83916 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.11■□□□□ 0.49
CBX1P83916 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CBX1P83916 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CBX1P83916 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CBX1P83916 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX1P83916 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.1■□□□□ 0.49
CBX1P83916 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.1■□□□□ 0.49
CBX1P83916 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX1P83916 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 AL355472.2-201ENST00000422958 438 ntBASIC18.1■□□□□ 0.49
CBX1P83916 CYP2T3P-201ENST00000601990 817 ntBASIC18.1■□□□□ 0.49
CBX1P83916 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 CICP24-201ENST00000605464 2705 ntBASIC18.1■□□□□ 0.49
CBX1P83916 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 FLJ16779-201ENST00000612722 7638 ntBASIC18.1■□□□□ 0.49
CBX1P83916 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX1P83916 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CBX1P83916 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.1■□□□□ 0.49
CBX1P83916 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX1P83916 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CBX1P83916 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms