Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
CMC4P56277 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CMC4P56277 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CMC4P56277 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CMC4P56277 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CMC4P56277 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.9□□□□□ -0.34
CMC4P56277 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 AP001005.1-201ENST00000571755 1248 ntBASIC12.9□□□□□ -0.34
CMC4P56277 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 GGTLC5P-201ENST00000617623 998 ntBASIC12.9□□□□□ -0.34
CMC4P56277 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CMC4P56277 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.9□□□□□ -0.34
CMC4P56277 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.9□□□□□ -0.34
CMC4P56277 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CMC4P56277 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CMC4P56277 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CMC4P56277 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 LINC00982-205ENST00000420957 435 ntBASIC12.89□□□□□ -0.35
CMC4P56277 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.89□□□□□ -0.35
CMC4P56277 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.89□□□□□ -0.35
CMC4P56277 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.89□□□□□ -0.35
CMC4P56277 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 AP002469.2-201ENST00000531724 424 ntBASIC12.89□□□□□ -0.35
CMC4P56277 AC105339.3-201ENST00000560043 636 ntBASIC12.89□□□□□ -0.35
CMC4P56277 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 AL139424.1-201ENST00000607572 797 ntBASIC12.89□□□□□ -0.35
CMC4P56277 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.89□□□□□ -0.35
CMC4P56277 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 AL031008.1-201ENST00000619963 541 ntBASIC12.89□□□□□ -0.35
CMC4P56277 TP73-AS1-207ENST00000624167 988 ntBASIC12.89□□□□□ -0.35
CMC4P56277 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms