Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
GPC3P51654 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
GPC3P51654 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
GPC3P51654 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
GPC3P51654 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
GPC3P51654 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 PTCHD3P3-201ENST00000403073 906 ntBASIC19.11■□□□□ 0.65
GPC3P51654 ACTG1P4-201ENST00000425123 1122 ntBASIC19.11■□□□□ 0.65
GPC3P51654 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.11■□□□□ 0.65
GPC3P51654 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.11■□□□□ 0.65
GPC3P51654 AC046185.3-201ENST00000623228 1824 ntBASIC19.11■□□□□ 0.65
GPC3P51654 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.11■□□□□ 0.65
GPC3P51654 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC3P51654 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GPC3P51654 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GPC3P51654 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC3P51654 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GPC3P51654 KRT18P2-201ENST00000447938 1258 ntBASIC19.1■□□□□ 0.65
GPC3P51654 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.1■□□□□ 0.65
GPC3P51654 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.1■□□□□ 0.65
GPC3P51654 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC3P51654 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC3P51654 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC3P51654 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC3P51654 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.09■□□□□ 0.65
GPC3P51654 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
GPC3P51654 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GPC3P51654 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
GPC3P51654 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 MIR1233-2-201ENST00000408138 82 ntBASIC19.09■□□□□ 0.65
GPC3P51654 MIR1233-1-201ENST00000408722 82 ntBASIC19.09■□□□□ 0.65
GPC3P51654 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.09■□□□□ 0.65
GPC3P51654 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.09■□□□□ 0.65
GPC3P51654 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.09■□□□□ 0.65
GPC3P51654 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.09■□□□□ 0.65
GPC3P51654 MIR4751-201ENST00000578027 74 ntBASIC19.09■□□□□ 0.65
GPC3P51654 AL139327.4-201ENST00000612362 153 ntBASIC19.09■□□□□ 0.65
GPC3P51654 AC004790.2-201ENST00000623588 572 ntBASIC19.09■□□□□ 0.65
GPC3P51654 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GPC3P51654 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
GPC3P51654 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC3P51654 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GPC3P51654 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
GPC3P51654 AL135999.2-201ENST00000622438 1686 ntBASIC19.08■□□□□ 0.65
GPC3P51654 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GPC3P51654 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
GPC3P51654 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms