Protein–RNA interactions for Protein: P47898

HTR5A, 5-hydroxytryptamine receptor 5A, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR5AP47898 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HTR5AP47898 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR5AP47898 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR5AP47898 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR5AP47898 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR5AP47898 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR5AP47898 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HTR5AP47898 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR5AP47898 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR5AP47898 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR5AP47898 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR5AP47898 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR5AP47898 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR5AP47898 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR5AP47898 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR5AP47898 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
HTR5AP47898 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
HTR5AP47898 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 NUS1P2-201ENST00000417358 873 ntBASIC15.27■□□□□ 0.04
HTR5AP47898 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR5AP47898 HCG4P8-203ENST00000443049 980 ntBASIC15.27■□□□□ 0.04
HTR5AP47898 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.27■□□□□ 0.04
HTR5AP47898 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.27■□□□□ 0.04
HTR5AP47898 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR5AP47898 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.27■□□□□ 0.04
HTR5AP47898 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.27■□□□□ 0.04
HTR5AP47898 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.27■□□□□ 0.04
HTR5AP47898 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 AC114341.1-201ENST00000618070 349 ntBASIC15.27■□□□□ 0.04
HTR5AP47898 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HTR5AP47898 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR5AP47898 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR5AP47898 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HTR5AP47898 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR5AP47898 AL049757.1-201ENST00000616842 1596 ntBASIC15.27■□□□□ 0.03
HTR5AP47898 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR5AP47898 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
HTR5AP47898 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
HTR5AP47898 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.27■□□□□ 0.03
HTR5AP47898 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 KRT8P10-201ENST00000450021 1447 ntBASIC15.26■□□□□ 0.03
HTR5AP47898 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR5AP47898 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.26■□□□□ 0.03
HTR5AP47898 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR5AP47898 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTR5AP47898 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 RCN1P2-201ENST00000398357 915 ntBASIC15.26■□□□□ 0.03
HTR5AP47898 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR5AP47898 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 POM121L3P-201ENST00000419331 1163 ntBASIC15.26■□□□□ 0.03
HTR5AP47898 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.26■□□□□ 0.03
HTR5AP47898 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HTR5AP47898 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.26■□□□□ 0.03
HTR5AP47898 AC138894.3-201ENST00000603787 634 ntBASIC15.26■□□□□ 0.03
HTR5AP47898 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 AC108860.2-201ENST00000562760 2183 ntBASIC15.26■□□□□ 0.03
HTR5AP47898 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR5AP47898 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HTR5AP47898 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR5AP47898 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR5AP47898 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms