Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.57■□□□□ 0.72
PRPHP41219 AC012313.10-201ENST00000623509 926 ntBASIC19.57■□□□□ 0.72
PRPHP41219 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRPHP41219 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.57■□□□□ 0.72
PRPHP41219 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.56■□□□□ 0.72
PRPHP41219 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.56■□□□□ 0.72
PRPHP41219 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 AKR1C7P-201ENST00000305623 895 ntBASIC19.56■□□□□ 0.72
PRPHP41219 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.56■□□□□ 0.72
PRPHP41219 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRPHP41219 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.56■□□□□ 0.72
PRPHP41219 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRPHP41219 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRPHP41219 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPHP41219 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPHP41219 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 AL356309.3-201ENST00000624132 1934 ntBASIC19.55■□□□□ 0.72
PRPHP41219 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPHP41219 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRPHP41219 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRPHP41219 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.55■□□□□ 0.72
PRPHP41219 SAPCD2P3-201ENST00000455031 850 ntBASIC19.55■□□□□ 0.72
PRPHP41219 FGFR3P6-201ENST00000457012 610 ntBASIC19.55■□□□□ 0.72
PRPHP41219 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.55■□□□□ 0.72
PRPHP41219 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
PRPHP41219 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRPHP41219 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRPHP41219 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPHP41219 AC124947.2-201ENST00000547118 1133 ntBASIC19.55■□□□□ 0.72
PRPHP41219 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.55■□□□□ 0.72
PRPHP41219 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPHP41219 MTDHP3-201ENST00000594186 672 ntBASIC19.55■□□□□ 0.72
PRPHP41219 LINC01711-201ENST00000598340 967 ntBASIC19.55■□□□□ 0.72
PRPHP41219 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.55■□□□□ 0.72
PRPHP41219 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRPHP41219 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPHP41219 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.55■□□□□ 0.72
PRPHP41219 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPHP41219 AL121761.2-201ENST00000598007 1648 ntBASIC19.54■□□□□ 0.72
PRPHP41219 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPHP41219 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPHP41219 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.54■□□□□ 0.72
PRPHP41219 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.54■□□□□ 0.72
PRPHP41219 NKAPP1-205ENST00000585790 367 ntBASIC19.54■□□□□ 0.72
PRPHP41219 AC008608.2-201ENST00000606089 416 ntBASIC19.54■□□□□ 0.72
PRPHP41219 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPHP41219 AL022326.1-202ENST00000641533 845 ntBASIC19.54■□□□□ 0.72
PRPHP41219 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PRPHP41219 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRPHP41219 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.54■□□□□ 0.72
PRPHP41219 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms