Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCNFP41002 AC124864.1-201ENST00000623408 392 ntBASIC17.46■□□□□ 0.39
CCNFP41002 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNFP41002 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CCNFP41002 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
CCNFP41002 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCNFP41002 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCNFP41002 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCNFP41002 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CCNFP41002 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNFP41002 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.45■□□□□ 0.38
CCNFP41002 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNFP41002 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
CCNFP41002 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 AC096633.1-201ENST00000422446 749 ntBASIC17.45■□□□□ 0.38
CCNFP41002 VENTXP7-201ENST00000475503 772 ntBASIC17.45■□□□□ 0.38
CCNFP41002 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNFP41002 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCNFP41002 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNFP41002 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNFP41002 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNFP41002 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNFP41002 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNFP41002 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNFP41002 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 AC246785.2-201ENST00000432512 513 ntBASIC17.44■□□□□ 0.38
CCNFP41002 AC011840.4-201ENST00000578471 627 ntBASIC17.44■□□□□ 0.38
CCNFP41002 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 AL353801.3-201ENST00000609898 542 ntBASIC17.44■□□□□ 0.38
CCNFP41002 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCNFP41002 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNFP41002 AC093525.9-201ENST00000624961 1746 ntBASIC17.44■□□□□ 0.38
CCNFP41002 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNFP41002 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 AC092053.1-201ENST00000605787 1936 ntBASIC17.43■□□□□ 0.38
CCNFP41002 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCNFP41002 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCNFP41002 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms