Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDE6BP35913 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.18■□□□□ 0.98
PDE6BP35913 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.18■□□□□ 0.98
PDE6BP35913 AP005018.1-201ENST00000525475 301 ntBASIC21.18■□□□□ 0.98
PDE6BP35913 MIR6080-201ENST00000617359 66 ntBASIC21.18■□□□□ 0.98
PDE6BP35913 AL358472.5-202ENST00000641448 1267 ntBASIC21.18■□□□□ 0.98
PDE6BP35913 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDE6BP35913 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PDE6BP35913 FLJ13224-201ENST00000313737 1514 ntBASIC21.18■□□□□ 0.98
PDE6BP35913 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDE6BP35913 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE6BP35913 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.18■□□□□ 0.98
PDE6BP35913 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.18■□□□□ 0.98
PDE6BP35913 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDE6BP35913 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6BP35913 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.17■□□□□ 0.98
PDE6BP35913 CRB3P1-201ENST00000449338 276 ntBASIC21.17■□□□□ 0.98
PDE6BP35913 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.17■□□□□ 0.98
PDE6BP35913 ALG1L8P-201ENST00000533887 760 ntBASIC21.17■□□□□ 0.98
PDE6BP35913 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PDE6BP35913 AC027307.3-201ENST00000594262 1100 ntBASIC21.17■□□□□ 0.98
PDE6BP35913 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6BP35913 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.17■□□□□ 0.98
PDE6BP35913 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.17■□□□□ 0.98
PDE6BP35913 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.17■□□□□ 0.98
PDE6BP35913 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDE6BP35913 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.17■□□□□ 0.98
PDE6BP35913 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PDE6BP35913 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PDE6BP35913 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE6BP35913 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.16■□□□□ 0.98
PDE6BP35913 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
PDE6BP35913 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.16■□□□□ 0.98
PDE6BP35913 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6BP35913 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.16■□□□□ 0.98
PDE6BP35913 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.16■□□□□ 0.98
PDE6BP35913 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDE6BP35913 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.16■□□□□ 0.98
PDE6BP35913 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6BP35913 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.16■□□□□ 0.98
PDE6BP35913 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PDE6BP35913 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDE6BP35913 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6BP35913 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.16■□□□□ 0.98
PDE6BP35913 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PDE6BP35913 WASH6P-202ENST00000359512 1437 ntBASIC21.15■□□□□ 0.98
PDE6BP35913 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
PDE6BP35913 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PDE6BP35913 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.15■□□□□ 0.98
PDE6BP35913 CR383656.12-201ENST00000549567 513 ntBASIC21.15■□□□□ 0.98
PDE6BP35913 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.15■□□□□ 0.98
PDE6BP35913 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PDE6BP35913 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.15■□□□□ 0.98
PDE6BP35913 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.15■□□□□ 0.98
PDE6BP35913 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PDE6BP35913 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
PDE6BP35913 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDE6BP35913 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.15■□□□□ 0.98
PDE6BP35913 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDE6BP35913 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.14■□□□□ 0.98
PDE6BP35913 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.14■□□□□ 0.98
PDE6BP35913 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDE6BP35913 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDE6BP35913 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PDE6BP35913 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.14■□□□□ 0.98
PDE6BP35913 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms