Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HOXA10P31260 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXA10P31260 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.97■□□□□ 0.95
HOXA10P31260 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HOXA10P31260 MIR3909-201ENST00000579518 119 ntBASIC20.97■□□□□ 0.95
HOXA10P31260 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.97■□□□□ 0.95
HOXA10P31260 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 AC008761.3-201ENST00000624803 892 ntBASIC20.97■□□□□ 0.95
HOXA10P31260 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HOXA10P31260 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HOXA10P31260 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.97■□□□□ 0.95
HOXA10P31260 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXA10P31260 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HOXA10P31260 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.96■□□□□ 0.95
HOXA10P31260 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA10P31260 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 RNU1-129P-201ENST00000384064 167 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 AC005034.1-201ENST00000426657 489 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.96■□□□□ 0.95
HOXA10P31260 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXA10P31260 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 AC097493.3-201ENST00000509725 367 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 ALG1L8P-201ENST00000533887 760 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 AC005225.4-201ENST00000557330 545 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXA10P31260 AP000842.3-202ENST00000569238 1080 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HOXA10P31260 U1.21-201ENST00000580816 167 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 LINC02560-201ENST00000596379 459 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 AC012645.4-201ENST00000610691 1061 ntBASIC20.96■□□□□ 0.95
HOXA10P31260 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXA10P31260 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA10P31260 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HOXA10P31260 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HOXA10P31260 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
HOXA10P31260 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA10P31260 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXA10P31260 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.95■□□□□ 0.94
HOXA10P31260 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA10P31260 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXA10P31260 AL390754.1-201ENST00000619088 582 ntBASIC20.95■□□□□ 0.94
HOXA10P31260 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA10P31260 SLC22A20-204ENST00000530038 1673 ntBASIC20.95■□□□□ 0.94
HOXA10P31260 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA10P31260 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HOXA10P31260 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 AC120498.9-201ENST00000339021 3867 ntBASIC20.95■□□□□ 0.94
HOXA10P31260 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA10P31260 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA10P31260 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA10P31260 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA10P31260 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXA10P31260 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA10P31260 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HOXA10P31260 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
HOXA10P31260 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HOXA10P31260 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
HOXA10P31260 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 AC009113.1-201ENST00000570267 2443 ntBASIC20.94■□□□□ 0.94
HOXA10P31260 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA10P31260 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms