Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RFX1P22670 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.88■□□□□ 0.61
RFX1P22670 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.88■□□□□ 0.61
RFX1P22670 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.88■□□□□ 0.61
RFX1P22670 RPL13AP23-201ENST00000480739 586 ntBASIC18.88■□□□□ 0.61
RFX1P22670 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX1P22670 AC009533.2-201ENST00000543664 586 ntBASIC18.88■□□□□ 0.61
RFX1P22670 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.88■□□□□ 0.61
RFX1P22670 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.88■□□□□ 0.61
RFX1P22670 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.88■□□□□ 0.61
RFX1P22670 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFX1P22670 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFX1P22670 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX1P22670 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX1P22670 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFX1P22670 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX1P22670 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX1P22670 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFX1P22670 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX1P22670 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX1P22670 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFX1P22670 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX1P22670 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX1P22670 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX1P22670 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX1P22670 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX1P22670 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFX1P22670 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFX1P22670 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 RPS2P28-201ENST00000314255 741 ntBASIC18.86■□□□□ 0.61
RFX1P22670 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFX1P22670 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX1P22670 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.86■□□□□ 0.61
RFX1P22670 RNA5SP419-201ENST00000515908 135 ntBASIC18.86■□□□□ 0.61
RFX1P22670 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.86■□□□□ 0.61
RFX1P22670 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX1P22670 AC139887.3-201ENST00000568585 713 ntBASIC18.86■□□□□ 0.61
RFX1P22670 AC109462.3-201ENST00000573934 613 ntBASIC18.86■□□□□ 0.61
RFX1P22670 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX1P22670 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX1P22670 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RFX1P22670 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFX1P22670 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX1P22670 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX1P22670 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX1P22670 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RFX1P22670 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX1P22670 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RFX1P22670 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX1P22670 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RFX1P22670 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX1P22670 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX1P22670 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX1P22670 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms