Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG2P13521 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.92■□□□□ 0.78
SCG2P13521 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCG2P13521 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SCG2P13521 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.92■□□□□ 0.78
SCG2P13521 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SCG2P13521 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.91■□□□□ 0.78
SCG2P13521 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SCG2P13521 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCG2P13521 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SCG2P13521 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.91■□□□□ 0.78
SCG2P13521 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.91■□□□□ 0.78
SCG2P13521 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.91■□□□□ 0.78
SCG2P13521 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 AL773604.1-201ENST00000617417 272 ntBASIC19.91■□□□□ 0.78
SCG2P13521 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG2P13521 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.9■□□□□ 0.78
SCG2P13521 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SCG2P13521 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SCG2P13521 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG2P13521 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.9■□□□□ 0.78
SCG2P13521 AC079776.4-201ENST00000511039 504 ntBASIC19.9■□□□□ 0.78
SCG2P13521 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.9■□□□□ 0.78
SCG2P13521 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.9■□□□□ 0.78
SCG2P13521 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.9■□□□□ 0.78
SCG2P13521 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.9■□□□□ 0.78
SCG2P13521 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
SCG2P13521 AL590787.1-201ENST00000568856 1315 ntBASIC19.9■□□□□ 0.78
SCG2P13521 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.9■□□□□ 0.78
SCG2P13521 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG2P13521 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCG2P13521 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG2P13521 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.89■□□□□ 0.78
SCG2P13521 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SCG2P13521 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SCG2P13521 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SCG2P13521 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.89■□□□□ 0.77
SCG2P13521 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.89■□□□□ 0.77
SCG2P13521 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SCG2P13521 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.89■□□□□ 0.77
SCG2P13521 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.89■□□□□ 0.77
SCG2P13521 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.89■□□□□ 0.77
SCG2P13521 AC006557.2-201ENST00000592985 1240 ntBASIC19.89■□□□□ 0.77
SCG2P13521 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.89■□□□□ 0.77
SCG2P13521 LINC02012-201ENST00000608206 1725 ntBASIC19.89■□□□□ 0.77
SCG2P13521 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.89■□□□□ 0.77
SCG2P13521 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SCG2P13521 AC008735.5-201ENST00000623544 497 ntBASIC19.89■□□□□ 0.77
SCG2P13521 FAM215A-202ENST00000632077 792 ntBASIC19.89■□□□□ 0.77
SCG2P13521 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG2P13521 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.88■□□□□ 0.77
SCG2P13521 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCG2P13521 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCG2P13521 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCG2P13521 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCG2P13521 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCG2P13521 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.88■□□□□ 0.77
SCG2P13521 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCG2P13521 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms