Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC00265-3P-201ENST00000447588 903 ntBASIC15.96■□□□□ 0.15
THBS1P07996 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.96■□□□□ 0.15
THBS1P07996 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.96■□□□□ 0.15
THBS1P07996 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.96■□□□□ 0.15
THBS1P07996 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.96■□□□□ 0.15
THBS1P07996 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.96■□□□□ 0.15
THBS1P07996 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 AC114341.1-201ENST00000618070 349 ntBASIC15.96■□□□□ 0.15
THBS1P07996 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
THBS1P07996 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
THBS1P07996 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
THBS1P07996 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
THBS1P07996 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
THBS1P07996 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
THBS1P07996 PMPCAP1-201ENST00000508114 1576 ntBASIC15.96■□□□□ 0.14
THBS1P07996 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
THBS1P07996 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
THBS1P07996 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
THBS1P07996 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
THBS1P07996 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
THBS1P07996 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.95■□□□□ 0.14
THBS1P07996 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.95■□□□□ 0.14
THBS1P07996 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.95■□□□□ 0.14
THBS1P07996 AC092329.2-201ENST00000598402 547 ntBASIC15.95■□□□□ 0.14
THBS1P07996 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
THBS1P07996 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
THBS1P07996 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.95■□□□□ 0.14
THBS1P07996 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 AC011676.5-201ENST00000624864 2660 ntBASIC15.94■□□□□ 0.14
THBS1P07996 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 PKD1P1-201ENST00000458669 6805 ntBASIC15.94■□□□□ 0.14
THBS1P07996 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
THBS1P07996 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 RCN1P2-201ENST00000398357 915 ntBASIC15.94■□□□□ 0.14
THBS1P07996 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
THBS1P07996 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
THBS1P07996 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.94■□□□□ 0.14
THBS1P07996 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.94■□□□□ 0.14
THBS1P07996 AC074051.2-201ENST00000565115 352 ntBASIC15.94■□□□□ 0.14
THBS1P07996 AC012615.1-201ENST00000565797 1299 ntBASIC15.94■□□□□ 0.14
THBS1P07996 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.94■□□□□ 0.14
THBS1P07996 MIR3180-1-201ENST00000580374 94 ntBASIC15.94■□□□□ 0.14
THBS1P07996 MIR3180-3-201ENST00000584616 94 ntBASIC15.94■□□□□ 0.14
THBS1P07996 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.94■□□□□ 0.14
THBS1P07996 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.94■□□□□ 0.14
THBS1P07996 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
THBS1P07996 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.94■□□□□ 0.14
THBS1P07996 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
THBS1P07996 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms