Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 AC063926.3-201ENST00000624734 5658 ntBASIC15.11■□□□□ 0.01
SFTPBP07988 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 AC046158.3-201ENST00000624947 2558 ntBASIC15.11■□□□□ 0.01
SFTPBP07988 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.11■□□□□ 0.01
SFTPBP07988 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.11■□□□□ 0.01
SFTPBP07988 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SFTPBP07988 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SFTPBP07988 AL356309.3-201ENST00000624132 1934 ntBASIC15.11■□□□□ 0.01
SFTPBP07988 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SFTPBP07988 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.11■□□□□ 0.01
SFTPBP07988 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SFTPBP07988 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SFTPBP07988 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.1■□□□□ 0.01
SFTPBP07988 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.1■□□□□ 0.01
SFTPBP07988 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.1■□□□□ 0.01
SFTPBP07988 AP001094.4-201ENST00000579008 2176 ntBASIC15.1■□□□□ 0.01
SFTPBP07988 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 TSPY12P-201ENST00000421279 868 ntBASIC15.1■□□□□ 0.01
SFTPBP07988 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.1■□□□□ 0.01
SFTPBP07988 DDX43P3-201ENST00000441064 443 ntBASIC15.1■□□□□ 0.01
SFTPBP07988 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.1■□□□□ 0.01
SFTPBP07988 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.1■□□□□ 0.01
SFTPBP07988 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.1■□□□□ 0.01
SFTPBP07988 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.1■□□□□ 0.01
SFTPBP07988 AC011498.5-201ENST00000592027 486 ntBASIC15.1■□□□□ 0.01
SFTPBP07988 AC009154.2-201ENST00000621177 724 ntBASIC15.1■□□□□ 0.01
SFTPBP07988 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.1■□□□□ 0.01
SFTPBP07988 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SFTPBP07988 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
SFTPBP07988 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SFTPBP07988 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SFTPBP07988 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.09■□□□□ 0.01
SFTPBP07988 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SFTPBP07988 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SFTPBP07988 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SFTPBP07988 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SFTPBP07988 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SFTPBP07988 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.09■□□□□ 0.01
SFTPBP07988 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SFTPBP07988 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SFTPBP07988 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.09■□□□□ 0.01
SFTPBP07988 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.09■□□□□ 0.01
SFTPBP07988 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SFTPBP07988 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms