Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 KRT16P4-201ENST00000453883 522 ntBASIC17.1■□□□□ 0.33
CAPN1P07384 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN1P07384 AL160237.2-201ENST00000556165 472 ntBASIC17.1■□□□□ 0.33
CAPN1P07384 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN1P07384 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN1P07384 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 PKD1P5-201ENST00000532415 10291 ntBASIC17.1■□□□□ 0.33
CAPN1P07384 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN1P07384 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN1P07384 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 LYSMD4-203ENST00000378904 2122 ntBASIC17.09■□□□□ 0.33
CAPN1P07384 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CAPN1P07384 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CAPN1P07384 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 AKR1C7P-201ENST00000305623 895 ntBASIC17.09■□□□□ 0.33
CAPN1P07384 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 AC005104.2-201ENST00000427818 678 ntBASIC17.09■□□□□ 0.33
CAPN1P07384 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.09■□□□□ 0.33
CAPN1P07384 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CAPN1P07384 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CAPN1P07384 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CAPN1P07384 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN1P07384 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CAPN1P07384 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.08■□□□□ 0.33
CAPN1P07384 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.08■□□□□ 0.33
CAPN1P07384 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CAPN1P07384 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.08■□□□□ 0.33
CAPN1P07384 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CAPN1P07384 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN1P07384 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CAPN1P07384 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPN1P07384 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPN1P07384 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPN1P07384 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPN1P07384 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.08■□□□□ 0.32
CAPN1P07384 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPN1P07384 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPN1P07384 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 BNIP3P18-201ENST00000593976 575 ntBASIC17.08■□□□□ 0.32
CAPN1P07384 LINC01711-201ENST00000598340 967 ntBASIC17.08■□□□□ 0.32
CAPN1P07384 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CAPN1P07384 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms