Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOD2P04179 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.15■□□□□ 0.5
SOD2P04179 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOD2P04179 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOD2P04179 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SOD2P04179 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
SOD2P04179 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.14■□□□□ 0.5
SOD2P04179 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.14■□□□□ 0.49
SOD2P04179 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.14■□□□□ 0.49
SOD2P04179 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 FAM8A3P-201ENST00000427218 844 ntBASIC18.14■□□□□ 0.49
SOD2P04179 KRT8P48-201ENST00000515599 1220 ntBASIC18.14■□□□□ 0.49
SOD2P04179 AC093520.2-201ENST00000561830 333 ntBASIC18.14■□□□□ 0.49
SOD2P04179 AC092364.2-202ENST00000597012 1073 ntBASIC18.14■□□□□ 0.49
SOD2P04179 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.14■□□□□ 0.49
SOD2P04179 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 AC093512.1-201ENST00000617969 520 ntBASIC18.14■□□□□ 0.49
SOD2P04179 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.14■□□□□ 0.49
SOD2P04179 AC009093.7-201ENST00000623853 1223 ntBASIC18.14■□□□□ 0.49
SOD2P04179 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.14■□□□□ 0.49
SOD2P04179 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.14■□□□□ 0.49
SOD2P04179 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.14■□□□□ 0.49
SOD2P04179 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SOD2P04179 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SOD2P04179 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOD2P04179 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
SOD2P04179 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SOD2P04179 AC133963.1-201ENST00000504166 1679 ntBASIC18.13■□□□□ 0.49
SOD2P04179 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SOD2P04179 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SOD2P04179 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.13■□□□□ 0.49
SOD2P04179 RN7SL589P-201ENST00000481268 310 ntBASIC18.13■□□□□ 0.49
SOD2P04179 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.13■□□□□ 0.49
SOD2P04179 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.13■□□□□ 0.49
SOD2P04179 AC005412.3-201ENST00000580309 715 ntBASIC18.13■□□□□ 0.49
SOD2P04179 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SOD2P04179 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SOD2P04179 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SOD2P04179 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
SOD2P04179 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOD2P04179 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.13■□□□□ 0.49
SOD2P04179 AL355312.1-201ENST00000407115 2176 ntBASIC18.13■□□□□ 0.49
SOD2P04179 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.12■□□□□ 0.49
SOD2P04179 TFAMP1-201ENST00000412727 736 ntBASIC18.12■□□□□ 0.49
SOD2P04179 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.12■□□□□ 0.49
SOD2P04179 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.12■□□□□ 0.49
SOD2P04179 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.12■□□□□ 0.49
SOD2P04179 SPCS2P1-201ENST00000561636 679 ntBASIC18.12■□□□□ 0.49
SOD2P04179 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.12■□□□□ 0.49
SOD2P04179 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.12■□□□□ 0.49
SOD2P04179 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SOD2P04179 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.12■□□□□ 0.49
SOD2P04179 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.12■□□□□ 0.49
SOD2P04179 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SOD2P04179 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOD2P04179 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOD2P04179 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOD2P04179 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SOD2P04179 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.11■□□□□ 0.49
SOD2P04179 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.11■□□□□ 0.49
SOD2P04179 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SOD2P04179 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOD2P04179 HMGA1P7-201ENST00000406908 502 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms