Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.03■□□□□ 0.32
CPNE6O95741 MIR1233-2-201ENST00000408138 82 ntBASIC17.03■□□□□ 0.32
CPNE6O95741 MIR1233-1-201ENST00000408722 82 ntBASIC17.03■□□□□ 0.32
CPNE6O95741 MED15P5-201ENST00000423150 992 ntBASIC17.03■□□□□ 0.32
CPNE6O95741 PRYP5-201ENST00000451909 266 ntBASIC17.03■□□□□ 0.32
CPNE6O95741 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE6O95741 AC034105.1-201ENST00000563488 319 ntBASIC17.03■□□□□ 0.32
CPNE6O95741 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE6O95741 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE6O95741 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE6O95741 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE6O95741 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE6O95741 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 HTR7P1-202ENST00000624664 4411 ntBASIC17.02■□□□□ 0.32
CPNE6O95741 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE6O95741 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CPNE6O95741 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 AC006557.2-201ENST00000592985 1240 ntBASIC17.02■□□□□ 0.32
CPNE6O95741 AC140113.2-201ENST00000604370 208 ntBASIC17.02■□□□□ 0.32
CPNE6O95741 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE6O95741 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CPNE6O95741 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE6O95741 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CPNE6O95741 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE6O95741 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE6O95741 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CPNE6O95741 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE6O95741 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CPNE6O95741 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.02■□□□□ 0.31
CPNE6O95741 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.02■□□□□ 0.31
CPNE6O95741 AC018695.7-201ENST00000624587 2492 ntBASIC17.02■□□□□ 0.31
CPNE6O95741 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPNE6O95741 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 AC046158.3-201ENST00000624947 2558 ntBASIC17.01■□□□□ 0.31
CPNE6O95741 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 AP002414.3-201ENST00000589352 1468 ntBASIC17.01■□□□□ 0.31
CPNE6O95741 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE6O95741 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE6O95741 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE6O95741 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 SPDYE21P-201ENST00000413323 827 ntBASIC17.01■□□□□ 0.31
CPNE6O95741 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE6O95741 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE6O95741 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE6O95741 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE6O95741 MIR1199-201ENST00000621445 119 ntBASIC17.01■□□□□ 0.31
CPNE6O95741 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE6O95741 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CPNE6O95741 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CPNE6O95741 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms