Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH8O95206 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH8O95206 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH8O95206 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH8O95206 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 OR6D1P-203ENST00000641209 4860 ntBASIC17.31■□□□□ 0.36
PCDH8O95206 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH8O95206 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
PCDH8O95206 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH8O95206 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 AC023274.1-201ENST00000418278 595 ntBASIC17.31■□□□□ 0.36
PCDH8O95206 ACTG1P4-201ENST00000425123 1122 ntBASIC17.31■□□□□ 0.36
PCDH8O95206 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDH8O95206 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH8O95206 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH8O95206 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDH8O95206 AL805961.1-202ENST00000641562 540 ntBASIC17.31■□□□□ 0.36
PCDH8O95206 AL135999.2-201ENST00000622438 1686 ntBASIC17.31■□□□□ 0.36
PCDH8O95206 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDH8O95206 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH8O95206 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH8O95206 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
PCDH8O95206 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDH8O95206 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 VN2R19P-201ENST00000442399 1052 ntBASIC17.3■□□□□ 0.36
PCDH8O95206 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH8O95206 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDH8O95206 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH8O95206 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
PCDH8O95206 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 AC006116.8-202ENST00000587620 1550 ntBASIC17.3■□□□□ 0.36
PCDH8O95206 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH8O95206 PI4KAP1-204ENST00000612579 1703 ntBASIC17.3■□□□□ 0.36
PCDH8O95206 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH8O95206 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH8O95206 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 AL355312.1-201ENST00000407115 2176 ntBASIC17.29■□□□□ 0.36
PCDH8O95206 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 LINC00304-203ENST00000565008 1864 ntBASIC17.29■□□□□ 0.36
PCDH8O95206 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH8O95206 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDH8O95206 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH8O95206 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 AP002414.1-201ENST00000391405 1147 ntBASIC17.29■□□□□ 0.36
PCDH8O95206 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
PCDH8O95206 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDH8O95206 SLC25A6P5-201ENST00000435663 894 ntBASIC17.29■□□□□ 0.36
PCDH8O95206 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDH8O95206 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PCDH8O95206 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH8O95206 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDH8O95206 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH8O95206 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDH8O95206 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms