Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.24■□□□□ 0.67
CLSTN1O94985 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CLSTN1O94985 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLSTN1O94985 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLSTN1O94985 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLSTN1O94985 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CLSTN1O94985 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.23■□□□□ 0.67
CLSTN1O94985 KRT8P47-201ENST00000604727 1398 ntBASIC19.23■□□□□ 0.67
CLSTN1O94985 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLSTN1O94985 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLSTN1O94985 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLSTN1O94985 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.23■□□□□ 0.67
CLSTN1O94985 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.23■□□□□ 0.67
CLSTN1O94985 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.23■□□□□ 0.67
CLSTN1O94985 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.23■□□□□ 0.67
CLSTN1O94985 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.23■□□□□ 0.67
CLSTN1O94985 TPSP2-201ENST00000561760 610 ntBASIC19.23■□□□□ 0.67
CLSTN1O94985 AC138894.3-201ENST00000603787 634 ntBASIC19.23■□□□□ 0.67
CLSTN1O94985 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CLSTN1O94985 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.23■□□□□ 0.67
CLSTN1O94985 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CLSTN1O94985 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLSTN1O94985 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.22■□□□□ 0.67
CLSTN1O94985 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC19.22■□□□□ 0.67
CLSTN1O94985 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.22■□□□□ 0.67
CLSTN1O94985 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLSTN1O94985 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.22■□□□□ 0.67
CLSTN1O94985 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.22■□□□□ 0.67
CLSTN1O94985 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLSTN1O94985 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.22■□□□□ 0.67
CLSTN1O94985 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.22■□□□□ 0.67
CLSTN1O94985 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.22■□□□□ 0.67
CLSTN1O94985 AP002383.4-201ENST00000442518 975 ntBASIC19.22■□□□□ 0.67
CLSTN1O94985 AC096582.2-201ENST00000510860 516 ntBASIC19.22■□□□□ 0.67
CLSTN1O94985 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.22■□□□□ 0.67
CLSTN1O94985 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CLSTN1O94985 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.22■□□□□ 0.67
CLSTN1O94985 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CLSTN1O94985 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.22■□□□□ 0.67
CLSTN1O94985 AC124067.4-201ENST00000519691 2379 ntBASIC19.22■□□□□ 0.67
CLSTN1O94985 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLSTN1O94985 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.22■□□□□ 0.67
CLSTN1O94985 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.21■□□□□ 0.67
CLSTN1O94985 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.21■□□□□ 0.67
CLSTN1O94985 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.21■□□□□ 0.67
CLSTN1O94985 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLSTN1O94985 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 AL139384.1-201ENST00000612143 3047 ntBASIC19.21■□□□□ 0.67
CLSTN1O94985 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms