Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.3■□□□□ 0.36
NDUFS3O75489 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS3O75489 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
NDUFS3O75489 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NDUFS3O75489 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFS3O75489 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFS3O75489 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NDUFS3O75489 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS3O75489 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS3O75489 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NDUFS3O75489 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
NDUFS3O75489 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFS3O75489 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFS3O75489 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NDUFS3O75489 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NDUFS3O75489 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFS3O75489 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NDUFS3O75489 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 AC093525.9-201ENST00000624961 1746 ntBASIC17.29■□□□□ 0.36
NDUFS3O75489 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 AC080080.1-201ENST00000625121 2420 ntBASIC17.29■□□□□ 0.36
NDUFS3O75489 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NDUFS3O75489 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
NDUFS3O75489 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NDUFS3O75489 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS3O75489 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NDUFS3O75489 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NDUFS3O75489 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NDUFS3O75489 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.28■□□□□ 0.36
NDUFS3O75489 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NDUFS3O75489 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NDUFS3O75489 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.28■□□□□ 0.36
NDUFS3O75489 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.28■□□□□ 0.36
NDUFS3O75489 AL591684.3-201ENST00000605187 298 ntBASIC17.28■□□□□ 0.36
NDUFS3O75489 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFS3O75489 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.28■□□□□ 0.36
NDUFS3O75489 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFS3O75489 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
NDUFS3O75489 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDUFS3O75489 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
NDUFS3O75489 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.27■□□□□ 0.36
NDUFS3O75489 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NDUFS3O75489 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDUFS3O75489 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms