Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 HTR5BP-201ENST00000430851 1154 ntBASIC17.18■□□□□ 0.34
PCDHGA12O60330 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 ALG1L5P-201ENST00000482043 771 ntBASIC17.18■□□□□ 0.34
PCDHGA12O60330 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 AC132938.5-201ENST00000624980 1813 ntBASIC17.18■□□□□ 0.34
PCDHGA12O60330 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 AL049757.1-201ENST00000616842 1596 ntBASIC17.18■□□□□ 0.34
PCDHGA12O60330 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA12O60330 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA12O60330 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 AC135776.1-201ENST00000319817 2481 ntBASIC17.17■□□□□ 0.34
PCDHGA12O60330 AC003669.1-201ENST00000334569 611 ntBASIC17.17■□□□□ 0.34
PCDHGA12O60330 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 SIGLEC30P-201ENST00000455569 941 ntBASIC17.17■□□□□ 0.34
PCDHGA12O60330 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 CYMP-203ENST00000474680 1263 ntBASIC17.17■□□□□ 0.34
PCDHGA12O60330 RPS15P9-201ENST00000494093 319 ntBASIC17.17■□□□□ 0.34
PCDHGA12O60330 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 RFPL4AP1-201ENST00000530883 850 ntBASIC17.17■□□□□ 0.34
PCDHGA12O60330 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA12O60330 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA12O60330 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA12O60330 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA12O60330 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA12O60330 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGA12O60330 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA12O60330 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA12O60330 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA12O60330 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms