Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRPF3O43395 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.91■□□□□ 0.78
PRPF3O43395 AC092053.1-201ENST00000605787 1936 ntBASIC19.91■□□□□ 0.78
PRPF3O43395 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.91■□□□□ 0.78
PRPF3O43395 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PRPF3O43395 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.91■□□□□ 0.78
PRPF3O43395 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.91■□□□□ 0.78
PRPF3O43395 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRPF3O43395 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.9■□□□□ 0.78
PRPF3O43395 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRPF3O43395 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 KRT18P27-201ENST00000427733 1299 ntBASIC19.9■□□□□ 0.78
PRPF3O43395 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.9■□□□□ 0.78
PRPF3O43395 AC124947.2-201ENST00000547118 1133 ntBASIC19.9■□□□□ 0.78
PRPF3O43395 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.9■□□□□ 0.78
PRPF3O43395 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.9■□□□□ 0.78
PRPF3O43395 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PRPF3O43395 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPF3O43395 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRPF3O43395 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRPF3O43395 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRPF3O43395 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PRPF3O43395 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PRPF3O43395 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.89■□□□□ 0.77
PRPF3O43395 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 AC073621.1-201ENST00000392730 636 ntBASIC19.89■□□□□ 0.77
PRPF3O43395 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.89■□□□□ 0.77
PRPF3O43395 FRMD8P1-201ENST00000440433 1524 ntBASIC19.89■□□□□ 0.77
PRPF3O43395 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.89■□□□□ 0.77
PRPF3O43395 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.89■□□□□ 0.77
PRPF3O43395 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.89■□□□□ 0.77
PRPF3O43395 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.89■□□□□ 0.77
PRPF3O43395 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.89■□□□□ 0.77
PRPF3O43395 AC006557.2-201ENST00000592985 1240 ntBASIC19.89■□□□□ 0.77
PRPF3O43395 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 HTR7P1-202ENST00000624664 4411 ntBASIC19.89■□□□□ 0.77
PRPF3O43395 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRPF3O43395 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.89■□□□□ 0.77
PRPF3O43395 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PRPF3O43395 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PRPF3O43395 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PRPF3O43395 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 AC006504.4-201ENST00000592118 1568 ntBASIC19.88■□□□□ 0.77
PRPF3O43395 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.88■□□□□ 0.77
PRPF3O43395 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 MRPL3P1-201ENST00000400109 1033 ntBASIC19.88■□□□□ 0.77
PRPF3O43395 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.88■□□□□ 0.77
PRPF3O43395 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PRPF3O43395 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.88■□□□□ 0.77
PRPF3O43395 AC008735.5-201ENST00000623544 497 ntBASIC19.88■□□□□ 0.77
PRPF3O43395 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRPF3O43395 HCG11-201ENST00000411553 5696 ntBASIC19.88■□□□□ 0.77
PRPF3O43395 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.88■□□□□ 0.77
PRPF3O43395 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRPF3O43395 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRPF3O43395 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF3O43395 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms