Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIR3180-1-201ENST00000580374 94 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 MIR3180-3-201ENST00000584616 94 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 AC069148.1-201ENST00000608741 768 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 NPAP1P7-201ENST00000613027 823 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1AO00322 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1AO00322 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UPK1AO00322 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
UPK1AO00322 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1AO00322 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1AO00322 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
UPK1AO00322 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.44■□□□□ 0.22
UPK1AO00322 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
UPK1AO00322 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.44■□□□□ 0.22
UPK1AO00322 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
UPK1AO00322 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
UPK1AO00322 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.44■□□□□ 0.22
UPK1AO00322 AC122714.2-201ENST00000502787 707 ntBASIC16.44■□□□□ 0.22
UPK1AO00322 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 AC009533.2-201ENST00000543664 586 ntBASIC16.44■□□□□ 0.22
UPK1AO00322 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 Z69720.1-201ENST00000601483 472 ntBASIC16.44■□□□□ 0.22
UPK1AO00322 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.44■□□□□ 0.22
UPK1AO00322 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UPK1AO00322 AC019129.2-201ENST00000609837 1235 ntBASIC16.44■□□□□ 0.22
UPK1AO00322 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.44■□□□□ 0.22
UPK1AO00322 AC046185.3-201ENST00000623228 1824 ntBASIC16.44■□□□□ 0.22
UPK1AO00322 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UPK1AO00322 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.44■□□□□ 0.22
UPK1AO00322 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1AO00322 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1AO00322 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1AO00322 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 LINC02199-201ENST00000506655 2702 ntBASIC16.43■□□□□ 0.22
UPK1AO00322 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1AO00322 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1AO00322 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1AO00322 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
UPK1AO00322 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 FAM220CP-201ENST00000395253 831 ntBASIC16.43■□□□□ 0.22
UPK1AO00322 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.43■□□□□ 0.22
UPK1AO00322 LINC00265-3P-201ENST00000447588 903 ntBASIC16.43■□□□□ 0.22
UPK1AO00322 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1AO00322 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
UPK1AO00322 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1AO00322 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1AO00322 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
UPK1AO00322 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1AO00322 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms