Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC66A2RUB6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 HMGA1P5-201ENST00000412453 271 ntBASIC18.84■□□□□ 0.61
CCDC66A2RUB6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 AL138688.1-201ENST00000624851 1594 ntBASIC18.84■□□□□ 0.61
CCDC66A2RUB6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC66A2RUB6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC66A2RUB6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 FAM87A-204ENST00000613235 858 ntBASIC18.83■□□□□ 0.6
CCDC66A2RUB6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC66A2RUB6 KRT8P9-201ENST00000558927 1449 ntBASIC18.83■□□□□ 0.6
CCDC66A2RUB6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 LINC02228-204ENST00000642115 2962 ntBASIC18.82■□□□□ 0.6
CCDC66A2RUB6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 MMP23A-201ENST00000234610 1017 ntBASIC18.82■□□□□ 0.6
CCDC66A2RUB6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 AP000523.1-201ENST00000398242 1049 ntBASIC18.82■□□□□ 0.6
CCDC66A2RUB6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC66A2RUB6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms