Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 AC092647.4-201ENST00000457211 535 ntBASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV9S1A1TA0A576 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV9S1A1TA0A576 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV9S1A1TA0A576 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 AC111152.3-201ENST00000569699 673 ntBASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 STK25P1-201ENST00000585406 838 ntBASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 AL592071.1-201ENST00000611956 408 ntBASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV9S1A1TA0A576 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 AC103564.2-201ENST00000432853 1299 ntBASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV9S1A1TA0A576 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms